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rs51793311 SNP Detail
Summary
  • ID
    rs51793311
  • Variation Type
    SNP
  • Alleles
    C
Genome Location and Flanking Sequence
  • Location
    Chr4:143705177 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                        G TTAACAAGAG ACGGGATGCA AGGGACAGGG GAATGAGAAG
    CTGCCTGGGA ACCTGCAGCG CTCTTGGCCA GCTACTCGAA CAGCCTCCTC TTCTTTTTTT
    C
    TTCAGCAGCC ACAACATCTA GGCCACTGAC TTTTCAGGGA CCACTCCTCT TTTGCTCCGG
    ATTTCCGAGC TCATTTTTCC CTAGGCTCCA GGTCCATGGG C                    
    
    C = C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
DBA/2J
ss147809346 ENSMUSSNP3734378 ENSEMBL ENSEMBL_Sanger f SNP C
SNP Consensus Information
SNP Consensus Type
DBA/2J
rs51793311 SNP C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:143705177 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm68748 predicted gene, 68748 1165 bp upstream
Rr604212 regulatory region 604212 903 bp distal
Rr604213 regulatory region 604213 718 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory