rs51789099 SNP Detail

Summary

• ID
  rs51789099
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148791150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTA GAATAAAAAC GCCGGCCGCT
  C
  GCGGCTCGCC GATGTTTATG CCTCA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss148017006	ENSMUSSNP3444868	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321422332	CHEV_4_148080802	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs51789099					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148791150 () rs orientation: forward

Symbol	Name	Function Class
Rr406288	regulatory region 406288	1432 bp proximal
Rr604736	regulatory region 604736	1539 bp distal
Rr604737	regulatory region 604737	1753 bp distal