rs51784017 SNP Detail

Summary

• ID
  rs51784017
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138910234 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCCAGGG ATGGAAGCAG
  GAGGATCAGG AGTTCAAGGT CATCCCCAGC TACACAGTGA GTTTAAAGCC AGCCTATAAA
  GCCCTGGGTA TAGGGGCTGG AAAGATGGCT CAGCAGTTAC AAGCACTGAC TGCTCTCCCA
  GAGGTCCTGC TCTCCCAGAG GTCCTGAGTT CAAATTCCAG CAACCACATG GTGGCTCCAA
  Y
  AGGGTCTGAT GCCCTCTTCT GGTGTGTCTG AAGAGAGCGA CAGTGTACTC ACATAAATAT
  ATAAATGAAT CTCTTTTTTA AAGCCCTGGG TTTGATCCCT AGCACTTCTA AATAAATAGA
  TTCTATCTTG AAAACAGAAA CCAGAACAAA CAAACACCAG TCAAGCCTGA AGTTGCTATG
  AAGTTGCTAG TTCCAAAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147667485	ENSMUSSNP2893081	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51784017					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138910234 () rs orientation: forward

Symbol	Name	Function Class
Rr603129	regulatory region 603129	6 bp proximal
Rr603130	regulatory region 603130	725 bp proximal