rs51782977 SNP Detail

Summary

• ID
  rs51782977
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:67394162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCTACCT TCCTTGATTT
  TAATCTCCTT CTGCCCATTG TTTCTGCTGG CCTTTCTGGT TTTGGCATTG TTCTACAGTG
  GTTTTGACTC ATGCTTGAAG TGAATGCCTT ATTTTGAATG TCTTCTTAAA CCCTAGGATT
  CATCCTTTTC TACAGTGCCA ATGTCTTTCA TTGCCCTGTC TCAATTTCAG CATAGATAAA
  Y
  TTGCTTAATT TAATTTTCAT TACATTTTGA GCACTCAGTG TTCAGGTTAA AGAGTTTCAT
  TGAATGAGAT TAAAAATACA TTCTATAGAG TCTTTTTAAG TATTGGATTT ACAATCCATC
  TTAAATTTTG TGTGATGTCA TATAACAGTA CTTGTTTTCA TGTGGTTGTC CAGTGTGCTC
  ATCTACCACT GTTCATGTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146469580	ENSMUSSNP7156988	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51782977					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:67394162 () rs orientation: forward

Symbol	Name	Function Class
Rr593794	regulatory region 593794	1188 bp proximal
Rr593795	regulatory region 593795	1652 bp proximal