rs51775214 SNP Detail

Summary

• ID
  rs51775214
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125643145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTTCCCA AAGCTTTGGA
  AAATGTGTGT AACTAAATCT GTGCTTGACC ACTAGATGTC ACCAAAGGAT TGTTCACTGA
  AACAGGCAAG CGGTGCCTGT CAGAAAAACC ATTTCCTCTA TTTTTCAATG TAATCGAGAA
  GCAACAGTCG TAGCATAATA TTCTTAATAA TGCCCGCCTC CTTGGTGTCT CACTATTATG
  Y
  TTTTATGTGC AACATTCTTT TTTGAAACAG TCTTTAAATA ATAAAAAATG ATTCAAATAC
  TATAGAGAAG TCATTATCAT TTGAGATATA GGTGACAAAT GCTATAGCCT TCAGAATTAT
  ATATATATAT ATATACTATA TAATATATAG TATATAATGA ATAATATATT ATATATAATA
  TATATACACA CACATATATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135817771	ENSMUSSNP1554608	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51775214					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125643145 () rs orientation: forward

Symbol	Name	Function Class
Rr584614	regulatory region 584614	12 bp distal
Rr584615	regulatory region 584615	135 bp distal