rs51760213 SNP Detail

Summary

• ID
  rs51760213
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:28401909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTTGCTG CTGTGGACAT
  CACTGAGATC TGGAGCTTGC TCTGATAGAA TTTGCTGTTT ACAATATATG ATCTAGACAC
  CCAAAATTCT GAATTGAATA AAAGAAACAG AAGCCATTCA ATTTTGGATC AAGAATTTTT
  AGCACACATT TTTGCGAATT TAAAGCAGGT CAGTTATTAC TGAAATGCCT TCTATTATGT
  R
  GATAACTATA AAAGCTGAGG AAATGGAAGC GCAGAGACAT TAAACAGCAT GATCAAAGTC
  GCTTTCACCA CTAGGCAGTA AAGCCGAGGT CAGAAACTGA TCAGATCTGA GTCTGTGCTC
  TTAACTACTA AAAGGCTACT TCTCACACTA AATGATTGGC TAATTCCAAG TAATTATTAT
  TCATCGCAGA GAATGTCACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss134712493	ENSMUSSNP707545	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51760213					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:28401909 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr574565	regulatory region 574565			1422 bp distal
Tnik	TRAF2 and NCK interacting kinase			Intron
				Noncoding-Transcript-Variant