rs51759417 SNP Detail

Summary

• ID
  rs51759417
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:151043214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGACATCA GAAGGTAAAG
  GCACTTCCCA GCAAGCTTGA CAGTCTGAGG AAGGGCTGGC TGTGTGCGTC CATCCGGCAC
  ATACCCAGAG ACTGCTGACG AAGCTGCTGC TGCCCTCTCC AGCTCCATCT CTGACTAGTT
  CAGCCGCCTG TGCCATGCTT CCTGGAAATG AAAACAGGAG GTGCCCTTAC AGACTAAACA
  Y
  CCAGGTATCA GATACGCTTC TCAGAATTCC ATAGGAGCTG GGGAAGTGCC CGCTGGCTAC
  ACAGAGGCCT TACCACAACT CAACCGGGTG CCTAATGGGC AGGGCTTCCT GGTCTCCTGA
  TAAGAACTCC ACCCTGATGG GAAGCCTCTG ACAGGCTGCC CTGTGTTTCC AGCAGGTCCC
  TAGGGCACCA CCCACCTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	MSM/Ms
ss148060615	ENSMUSSNP4339632	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	MSM/Ms
rs51759417					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:151043214 () rs orientation: forward

Symbol	Name	Function Class
Rr605469	regulatory region 605469	1432 bp distal
Rr605470	regulatory region 605470	within coordinates