rs51755794 SNP Detail

Summary

• ID
  rs51755794
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:140477145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCC TGTTAGGACA GGAGGCAGCT
  R
  GGGGGTGGGG CATGGGGAGT GACCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147711237	ENSMUSSNP44196	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51755794					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140477145 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15196	CpG island 15196	536 bp proximal
Gm69576	predicted gene, 69576	within coordinates
Padi4	peptidyl arginine deiminase, type IV	Intron
Rr367763	regulatory region 367763	715 bp upstream
Rr603538	regulatory region 603538	1699 bp distal
Rr603539	regulatory region 603539	1920 bp distal
Rr603540	regulatory region 603540	1700 bp distal
Tssr1360	transcription start site region 1360	680 bp downstream
Tssr44277	transcription start site region 44277	712 bp downstream
Tssr44278	transcription start site region 44278	735 bp downstream
Tssr44279	transcription start site region 44279	768 bp downstream