rs51752443 SNP Detail

Summary

• ID
  rs51752443
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101295254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAATTGACA GCTTCCCACA
  TTATGACAGG TTTGAGACTG ACTGTGGTGG CAGAGTGGAA CACACAGGGG CAGAGCAGCA
  GACAGCGTTT TCTCAAATGG AAGCTTCCAG GTGTAGCCTC TGCCCTTAAC CTAGAGGTTT
  GTAGTCTTTC CCGGGGACTC CCGGGGACAT AGATCATTGT CAGCTTGGTC GCTGAGTCCT
  R
  CTCTATACAG AAACCTGAAA AAAAGGAAAA GCCAGTGAGA GGCCAGCAGT CAAGGGGAGC
  AGACAGCAGG GCTGGGGGTT GAGGGCAGAT TATGGCTTCT GTTCTAAGGC TGCATGGACT
  TTGGCAAGTG TTTTTGTATC ACCAGCCTCT GCTTCTGACA GCACAAAGGC TCTCCTGATT
  TCCCGTTCTT CCTACAGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147073787	ENSMUSSNP3139048	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320428376	CHEV_2_101305066	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51752443					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101295254 () rs orientation: forward

Symbol	Name	Function Class
Rr561501	regulatory region 561501	85 bp distal