About   Help   FAQ
rs51704013 SNP Detail
Summary
  • ID
    rs51704013
  • Variation Type
    SNP
  • Alleles
    G
Genome Location and Flanking Sequence
  • Location
    Chr2:143824564 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          CTTCCTAAAT GAAAAATATA CCTACCTTTT GACTTGCAAT
    TACAGCCCTA AGAATTTACT TTAAAGAGAC ATACAGCAAT ATATGTACAT TACTGCAACA
    G
    CAATTTTAAC ACCCAAAAAA GCCTGCACAC TACTTAAGTG TCATTTAAAT AAATCACAAT
    ACATTCACAC TACAGAATGT TATACAGCCA ACTGTGGCA                       
    
    G = G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
DBA/2J
ss147777061 ENSMUSSNP5622300 ENSEMBL ENSEMBL_Sanger f SNP G
SNP Consensus Information
SNP Consensus Type
DBA/2J
rs51704013 SNP G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:143824564 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr373991 regulatory region 373991 within coordinates
Rr566349 regulatory region 566349 1141 bp distal
Rr566350 regulatory region 566350 1651 bp distal
Rr566351 regulatory region 566351 149 bp distal
Rr566352 regulatory region 566352 367 bp proximal
Rr566353 regulatory region 566353 966 bp proximal
Rrbp1 ribosome binding protein 1 Intron
mRNA-UTR
Noncoding-Transcript-Variant
Tssr26572 transcription start site region 26572 520 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory