rs51697210 SNP Detail

Summary

• ID
  rs51697210
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108204447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATACAACC CAACATCCCT AAGGCTGGAG GCTATATCAT
  TTCTTCCTTA CCAGGAAGAA GTGCTTTTCA GCACTTAGCA AAACAAAATT GCTCTGAGAT
  M
  TTGTAAGGGG GTAGCGTGTG TCTCCGTTCA GTTTCTAAGG AGCAGCAGAG CAAACAGCCT
  AGGAGCTATG CAGTGGGCGC CATCATTCGG GGACTGAGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133497827	ENSMUSSNP3414166	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss321892126	CHEV_6_108177480	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51697210					SNP	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108204447 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr636058	regulatory region 636058	192 bp proximal