rs51695502 SNP Detail

Summary

• ID
  rs51695502
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:17764277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGACTCAGT GCAGTTGGTT TATCTGCACA GGAAATTCCT
  GCATGATGTA CTCGCTAGCA AGGGACTTCT GCTTGTTTTT GAGATTTGGT AGTAGGAGTA
  R
  TGCCGTGTGG GAGCATGGTG GGCTCTGTAC CGGCTGCTGT CTGTCCAGCC TCTGTTTTGT
  ACAAGGCATC CATAATTGTT TGAAATGGCT TCTCCAAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss133022232	ENSMUSSNP5882594	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss321756234	CHEV_6_17714278	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51695502					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17764277 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr626856	regulatory region 626856			within coordinates
St7	suppression of tumorigenicity 7			Intron
				Noncoding-Transcript-Variant
Tssr55099	transcription start site region 55099			1393 bp downstream