rs51687147 SNP Detail

Summary

• ID
  rs51687147
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:134002960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCC AAGTATCACT CGTCTTTTAT
  T
  TCTTATATGC GTCTGAAGAA AGTGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147522930	ENSMUSSNP2451292	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss321346335	CHEV_4_133831564	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51687147					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134002960 () rs orientation: forward

Symbol	Name	Function Class
Gm69734	predicted gene, 69734	within coordinates
Pdik1l	PDLIM1 interacting kinase 1 like	mRNA-UTR
Rr398573	regulatory region 398573	1988 bp downstream
Rr601621	regulatory region 601621	1554 bp distal
Rr601622	regulatory region 601622	1978 bp distal