rs51686433 SNP Detail

Summary

• ID
  rs51686433
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102710166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCAGTGTC CACTGTACCA
  GGTCTGGCTG AACCTTCCCT GATACATTCA CTTGCTCTGC TGGTTGTTTT CTGACCATTT
  GCTGTTTTGT TTTGTTTTGT TTTTTTAACC ACAGGACTGA AAAAACGTAC AAGGAAGGCC
  TTTGGAATAC GGAAGAAAGA AAAAGACACT GACTCTACGT ATGTACCTTA GAGTTTGCCC
  M
  ACTGGCTTCA GTCTAAGTCA CTGATGTTGG TTTAAAGAGG GCCTGCCCCA AAGGCTCTTC
  TGAGAGCGGA TGCTCATTTG TTTGGTTTTC TGGGCTTTCC CCATTTCTGG GTCAACTGCC
  ACTGTTCGTC ATAGATACTT AGATTTGTGC CTTTAAAAGG TAGACATTAT TCATCACAGA
  TTCAAAATTT TTTATCATGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147136052	ENSMUSSNP258478	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51686433					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102710166 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm69082	predicted gene, 69082			within coordinates
Rr596318	regulatory region 596318			224 bp proximal
Sgip1	SH3-domain GRB2-like (endophilin) interacting protein 1			Intron
				Noncoding-Transcript-Variant