rs51686109 SNP Detail

Summary

• ID
  rs51686109
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:59802244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AACGCGATCC AATTTCTTGT CTGCAAAACT CTTCCGATTC
  TGGCTTCAAG CAGATTTGCT TCTTTCTGGG GATGTCACCA GCTGAATTAA ACTGCCCACA
  S
  AAAATTCTCT CTGTTGGGGT TTTGCCTTCT CAGCTGGGTT ACCCCCCCCT TGTTTGAGTC
  AGCCTTCTGT GGTTTGTTAC ATGTCACTCT GAATGTCCTC T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146403175	ENSMUSSNP2431495	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51686109					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:59802244 () rs orientation: forward

Symbol	Name	Function Class
Rr398296	regulatory region 398296	1162 bp upstream
Rr593142	regulatory region 593142	248 bp proximal