rs51679607 SNP Detail

Summary

• ID
  rs51679607
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150296787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTG CATGCGCCTC CTCTACACCT
  A
  CCCAAATGTT TTGGAGTTCC CCCCC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148050276	ENSMUSSNP2890183	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321428647	CHEV_4_149586439	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs51679607					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150296787 () rs orientation: forward

Symbol	Name	Function Class
Rr605221	regulatory region 605221	1846 bp distal
Rr605222	regulatory region 605222	402 bp distal
Rr605223	regulatory region 605223	205 bp distal
Rr605224	regulatory region 605224	within coordinates
Rr605225	regulatory region 605225	1519 bp proximal
Rr605226	regulatory region 605226	1682 bp proximal
Rr605227	regulatory region 605227	1776 bp proximal