T CTTATTTTGA CTGAGGAAAC TGAAATTGAC AGGTTGAGTA ACTTGTTCAA AGGAACATGT GGCTGAGCTG GGCTTGTGCC TGGGTTCTTT GGGGCTGCCA M GCAAGCACCT TACTCACGTA GACTGCACTG CTAGGGATGT TTCAGGCTGT CAGGGTGCCG GGTTCCCTCA GAGGAGGGTC CTGAGGGACT GGGCGAGCAC A M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss120011483 | PARCsnp_1.19820 | PARC_SEQ | INBRED | f | SNP | A | C | |
ss120014487 | PARCsnp_1.09856 | PARC_SEQ | INBRED | f | SNP | A | C | |
ss146193509 | ENSMUSSNP6251812 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | C | |
SNP Consensus Information | ||||||||
SNP | Consensus Type | A/J |
C57BL/6J |
DBA/2J |
||||
rs51676113 | SNP | A | A | C |
Location: Chr1:172316308 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi1051 | CpG island 1051 | 1772 bp proximal | ||||||
Igsf9 | immunoglobulin superfamily, member 9 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr423586 | regulatory region 423586 | 1848 bp distal | ||||||
Rr423587 | regulatory region 423587 | within coordinates | ||||||
Rr423588 | regulatory region 423588 | 946 bp proximal | ||||||
Rr423589 | regulatory region 423589 | 1826 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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