rs51668314 SNP Detail

Summary

• ID
  rs51668314
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:133963022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGGAGTTCGC TTCCCAGCCC CCATATCAGG GGTTTCACAA
  CTGTGTTAGC TCTAGCTCCA TGAGATCTGC CCCCCTTCTT CTGGCCTCTC AGGGCATCTG
  K
  ACAGGCACAC TGATACATAC ATAAAAATAA AAATAAAAAT AAAGTAATTT TTAAAAAATG
  GTGAGGGGAG GAAGCTTTTC AGGGCTTCCT GAGAAATTA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133768837	ENSMUSSNP6804366	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321975824	CHEV_6_133936077	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51668314					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:133963022 () rs orientation: forward

Symbol	Name	Function Class
D6Mit290	DNA segment, Chr 6, Massachusetts Institute of Technology 290	405 bp proximal
Rr380154	regulatory region 380154	581 bp upstream
Rr639549	regulatory region 639549	703 bp distal