rs51667524 SNP Detail

Summary

• ID
  rs51667524
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132684392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAATTTCA TGAGGGCTCA
  TATATTCCAT ATATTCTTTA CATGATAACT AAATAATAAT TTACCAGGTT AAAAAATTTA
  ATAAACCTTA TAGTATGTAA TATATAATAT ATTTAATAAT ATAAAATTGT TATAGTTTAG
  CAAGTATGGG TCTAAAAGCA GAATGAAAAA AATTAAGAAA CCTCTGAGTT TATATTTAGT
  R
  TATGATGAAG TCACCTTGAT CAATGGAGAA AATGTAATTC TTTTGTTTTT TCAGGGTTTC
  TCTGTAGCCC TGGCTGTCCT GGAACTCACT CTGTAGACCA GGTTGGCCTG GAACTCAGAA
  ATCTGCCTGC CTCTGCCTCT GAAGTGCTGG GATTAAAGGC ATACGCCATC ACTGCCTGGC
  TTTTCTTTTG CTTTTTGTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135915679	ENSMUSSNP3328100	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51667524					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132684392 () rs orientation: forward

Symbol	Name	Function Class
Rr585492	regulatory region 585492	1617 bp proximal
Tssr35743	transcription start site region 35743	1420 bp upstream