rs51657650 SNP Detail

Summary

• ID
  rs51657650
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138280363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAC TGGAATGCAG GCTTCCAGTG
  S
  TGGTGGTGGG TGCTCCTGTA GGGCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147650068	ENSMUSSNP348385	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
ss321374816	CHEV_4_138108967	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51657650					SNP	G	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138280363 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15154	CpG island 15154	1725 bp proximal
Rr602963	regulatory region 602963	93 bp proximal
Rr602964	regulatory region 602964	1365 bp proximal