rs51654926 SNP Detail

Summary

• ID
  rs51654926
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4654771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACTGTTTC CCTTATGGAG
  ATTGTAGTCC TGAAGACCAA ATGCGAAGTC ACAGTGAGGG CACAGACAGT GGCACACACT
  TGCCCTCACA GCAGAACAGG GCCCTCCTGT GTGCTCACTT CCTGTCTCGA TGCCATGTCC
  TCGCCTCGCT GCCAGCTCTT CCCTCACTCC TGTACACCAG TGGATCCTCA AAGAATCAGG
  S
  CGTTTCTCTT GCTTGTGGCT TAGTTCTCTT GCCTCTGGAA GAAATAGCTA CTTCCTTTGG
  TGACCCAACA TTATTGCCCT TAGACGACAT TGAATCTGTG CATGTGGAAT GTGTCACCTA
  CGACAAAGTA GTCAGCAGGT AAGAACAGAG AAGACGGTAG TGAAGACAGA GTTCAAGGTG
  CTGAATGTCC ACTCAGGACA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132932408	ENSMUSSNP7112028	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51654926					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4654771 () rs orientation: forward

Symbol	Name	Function Class
Gm38761	predicted gene, 38761	within coordinates
Rr626043	regulatory region 626043	1753 bp distal
Rr626044	regulatory region 626044	1838 bp distal
Rr626045	regulatory region 626045	643 bp distal