rs51646457 SNP Detail

Summary

• ID
  rs51646457
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135002908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTGGCTCAG ACCTGGAACC
  TGTGCTCAGG AACCTGGTCA CAGTCATGCC TAGGGGTCTC AGTTTCTACT CTGATGCTCA
  TGAGCATGGG AGCACAGACA GATCTGGGAG GAGGAGGAAG AGGAAGACGA AGAGGAGAGA
  AAGTGTTTAT TCCGGGAGGT CCTACAGCAC CTTGCTTCCA ACTTTGAAAG GCAAGACGTT
  Y
  CTGCCCTGTG CTCCTGGTTG TTTTTGTAAC ACAGAGAAAG CTTGAAGATG GGTGGAGGTG
  TGTTCTCCTT ACACACCCCT CTGACCTCAT TCCCACCTGC TCCCCCTTGT GTGCCCCACC
  CCAGCTGCAG CAGCTTCCTT TCTAGTCCTT GGACATCGCA AGCACACCGC TGCCTCAGGG
  CCTTTGCGCG TGCTCTCATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147543419	ENSMUSSNP232391	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51646457					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135002908 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15068	CpG island 15068	1974 bp distal
Rr601982	regulatory region 601982	185 bp distal
Rr601983	regulatory region 601983	1217 bp proximal