rs51641469 SNP Detail

Summary

• ID
  rs51641469
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:38526865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATTGCTCT CAACTGCTGA
  GTCACCTCTT TAGCTCAATA AAATCTTCAA AGTAATTATT ATGGACCTGG CGAGATGGCT
  TCATGGGTGT CTTAGTCAGG GTTTCTATTC CTGCACAAAC ATCATGACCA AGAAGCAAGT
  TGGGGAGGAA AGGGTTTATT CGGCTTACAC TTCCTCACTG CTGTTCATCA CCAAAGGAAG
  T
  CAGGACTGGA ACTCAAGCAG GTCAGGAAGC AGGAGCTGAT GCAGAGGCCA TGGAGGGATG
  TTCCTTACTG GCATGCTTTG CTAGCTTGCT CAGCTTGCTT TCTTATAGAA CCCAAGACTA
  CCAGGCCAGA GATGGTCCCA CCCACAAGGG GCCTTTCCCC CTTGATCAGT AATTGAGAAA
  ATGCCTTACA GTTGGATCTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134837006	ENSMUSSNP2263830	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51641469					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38526865 () rs orientation: forward

Symbol	Name	Function Class
Ankrd50	ankyrin repeat domain 50	Intron
Rr575672	regulatory region 575672	879 bp distal