rs51629922 SNP Detail

Summary

• ID
  rs51629922
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147515173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCTCCAAAAT ATCATCCCTC ATGTAATCTG GAAAATTCTA
  GTATACTGTA TAACCTAAAG GTAGGTCAGT ATGTCAGAGA GTATCCTTTC CTGTTATATC
  A
  CTTGGTCTCA GCCTCTTCCA GATGGCTCAG TTTATATGAG AGTCTTTTAA GCAGCTTGAT
  TGGTCTCTGT GTCTCTCAGG TGGCCTGGCT GGTCTGTGAG T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147959806	ENSMUSSNP2382849	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51629922					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147515173 () rs orientation: forward

Symbol	Name	Function Class
Rr398814	regulatory region 398814	1646 bp downstream
Rr398815	regulatory region 398815	1205 bp downstream
Rr398816	regulatory region 398816	299 bp downstream
Rr398817	regulatory region 398817	273 bp upstream
Rr604487	regulatory region 604487	1439 bp proximal