rs51623925 SNP Detail

Summary

• ID
  rs51623925
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:163551712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACACCCAG TGCTTCTAGC
  AATCCTACTG TGTGCCTCTT GTGCTATAAT TTGTGAAGAG TTAAGGTATT TTCAGTCAGT
  CTCTCTCGCT AGACCTTCAG CTTCTTTAAG GCCATATTTT TTAAAATATT TATTTATTTA
  TTTATTTATT TATTATATGT AAGTACACTA TAGTGTATCT TCAGACACTC CAGAAGAGAA
  Y
  ATCAGATTTC ATTATGCATG GTTGTGAGCC ACCATGTGGT TGCTGGGATT TGAACTCAGG
  ACCTTTGGAA AAGCAGTTGG CGTTCTTAAC CACTGAGCCA GCTCACCAGC CCCCGTAAGG
  CCATACTTGT GTCTGGCTGT TCTGTGTACA CAGCATGTAG TCACAAATCT GGTACTCAGT
  GAGTGGTCGG TGAGTTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148209568	ENSMUSSNP2155680	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51623925					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163551712 () rs orientation: forward

Symbol	Name	Function Class
Pkig	protein kinase inhibitor, gamma	Intron
Rr569473	regulatory region 569473	988 bp proximal