rs51610138 SNP Detail

Summary

• ID
  rs51610138
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38343374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCAGTTGCA CAGAAGTACT TTGCCTTGCC TTCTAAACGC
  AGAAAGAGGG GGAGGGGAGG GGGAGGTGGG AAGAGGAAGG ATCATTTTCC CTCTGTGTGT
  R
  TAAGTAATGA GAGCAAAGGA AAGAATGCAG GCAGGGTCAT TGAGTTCCTG AGTCTGTGAT
  ATTTACAGAG TCAAGGATTT CTGCTGGGTC TTTTGCTTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	CAST/EiJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
ss60391338	NES15888532	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G		G	A
ss320717763	CHEV_3_38188147	CHEVERUD	SCREENING_POP	f	SNP					A			A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	CAST/EiJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
rs51610138					SNP	A	G	A	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60391338	NES15888532	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38343374 () rs orientation: forward

Symbol	Name	Function Class
Rr575656	regulatory region 575656	within coordinates