rs51609230 SNP Detail

Summary

• ID
  rs51609230
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:10008697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGATGGAC AAAACCCAGA GAAGGAAAAT GGAGAAGCCA
  ATATACTTTG CAACTTTGGC TTTTTGATCT TTACAACAAG ATTCTCTGTG ACTGATGGTG
  R
  TGGCTTGGAA GACACTCAAA AAACAGGTGG TGCCAATGGA CACACTCCGA CCAAGTCTTT
  GAATGTACAA ACTTAATCTG CAGCCAAAGT CATTTAAAAA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss60968326	NES16161620	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs51609230					SNP	G	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60968326	NES16161620	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:10008697 () rs orientation: forward

Symbol	Name	Function Class
Gm71895	predicted gene, 71895	within coordinates
Vmn1r66	vomeronasal 1 receptor 66	Coding-NonSynonymous