rs51607355 SNP Detail

Summary

• ID
  rs51607355
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144921791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAACT GAGAGCCGGG ACAGTGTAGG
  G
  ATATAAATCA TCCTAGTTCA AACAT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss147848428	ENSMUSSNP82641	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321412796	CHEV_4_144785124	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs51607355					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144921791 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15267	CpG island 15267	within coordinates
Rr398672	regulatory region 398672	3 bp downstream
Rr604319	regulatory region 604319	227 bp distal
Rr604320	regulatory region 604320	852 bp distal
Rr604321	regulatory region 604321	within coordinates
Rr604322	regulatory region 604322	113 bp distal
Rr604323	regulatory region 604323	1474 bp proximal
Tssr44481	transcription start site region 44481	257 bp upstream
Tssr44482	transcription start site region 44482	228 bp upstream
Tssr44483	transcription start site region 44483	177 bp upstream
Vps13d	vacuolar protein sorting 13D	216 bp upstream