rs51606770 SNP Detail

Summary

• ID
  rs51606770
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152724748 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCATGTGGT AGGGGTAACA
  GGGTGGGGAC AGATGTGCAA TCTCTGGCCA GATGGTTCCG GGCTTTGTGA CAAAGCAGTC
  TGAGGAAGCT ATGGAGAGAG AGCAAGCCAC CAAGCCATAT TCCTGCATGG CCTCTGCTTT
  TAGTTCCATC TTCCTCCGGT TCCTGCCTTG AGTTCCAGCC CTGCCCTCCC TTTATGATGA
  W
  CCACAGTTAC AGAATGAAGT AAACCCTTTC CTCTCTACGC TGCTTTTAGT TGTGCTCAGC
  ACAGTAACTG GAACCCTAAG GCAGGGCCGC GTGGTCCATG ATACTTGCTG AAAGACAGCT
  GTTTGTGGAC AGAGCCCAGG GGATAAAGCA CTCACGTTGT GCGCAGAGGG CCTGAGGTCC
  AATCTCAATC ACTGTAAAAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136105698	ENSMUSSNP251119	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
ss321029604	CHEV_3_152682075	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51606770					SNP	T	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152724748 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Rr587644	regulatory region 587644	723 bp distal