rs51606386 SNP Detail

Summary

• ID
  rs51606386
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34284917 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAACAGCTC AATCCACTAG
  CAAGTACTTC ATGGATACAC CAGCAGTCCA GTTCAACAGA GTTGGGTTAG CAACAGCGGT
  GAGACTGCCT GCAGAGACAG CGAGAGACAA GTCAGCAGGA GGGACCAGAA GGAACACAGG
  AGTTCTTGGC TGTGCCTCTC TCAGGGAAGG GAAAATCAGC ATAGACTCCA GGCTCAGAAT
  Y
  GTTGCACAGC TAGCTCTATA AGCAAGCCAA GCGCAGCCTC CATCACTGCC CATTAAGTCC
  TTTTATCTTC TCTCTGAACA TCATGTGTCC TCCGTGAGCC TTGCCTCAGC ACATGTCTTG
  TCTCAGCACA AGTGTCTATC TCAGCCCGAG TCTGCAGAGT CAGCAAGAAA CTGCAGCACA
  CCACCAGAAG TTTTTGGTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134764574	ENSMUSSNP1640090	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51606386					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34284917 () rs orientation: forward

Symbol	Name	Function Class
Rr575112	regulatory region 575112	1004 bp proximal
Rr575113	regulatory region 575113	1286 bp proximal