rs51592366 SNP Detail

Summary

• ID
  rs51592366
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132650948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATGATCATT CATACAATAA ACCTTTTTTA AAAGTTATTT
  TTACTTGTAA ATGTGTTTGT GGGGCTGGAG AGATGGCTCA GCGCTGACTG TCTTCCAAGG
  R
  TCCTAAGTTC AATTCCCAGC AACCACATGG TGGCTCATAA CCATCTGTAA TGGGGTCTGA
  TGCCCTCTTC TAGTGTGTGT CTGAAGATAG CAACAGTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147479349	ENSMUSSNP2967170	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs51592366					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132650948 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14977	CpG island 14977	427 bp distal
Fam76a	family with sequence similarity 76, member A	1099 bp upstream
Gm69717	predicted gene, 69717	within coordinates
Rr398546	regulatory region 398546	657 bp downstream
Rr601111	regulatory region 601111	1155 bp distal
Rr601112	regulatory region 601112	589 bp distal
Rr601113	regulatory region 601113	1114 bp distal
Rr601114	regulatory region 601114	888 bp distal
Tssr43727	transcription start site region 43727	1093 bp upstream
Tssr43728	transcription start site region 43728	1074 bp upstream
Tssr43729	transcription start site region 43729	1036 bp upstream
Tssr43730	transcription start site region 43730	1024 bp upstream
Tssr43731	transcription start site region 43731	1011 bp upstream
Tssr43732	transcription start site region 43732	1006 bp upstream