rs51591560 SNP Detail

Summary

• ID
  rs51591560
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124380636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATCACTGC AAAGAGAGGC
  CCATTGGACT TGCAAACTTT ATATGCCCCA GTACAGGGGA ACGCCAGGGC CAAAAAATGG
  GAATGGGTGG GTAGGGGAGT TGGGGGGGGG AGGGGTATAG GGGACTTTTG GGATAGCATT
  CTAAATGTAA TTGAGGAAAA TACGTAATAA TAAAAAATAT ATATATAAAA AGAATACAGT
  Y
  TGTCCAATTT GTAAGTCCCA GTTTATTTTA GTGGAACTAA AATCAATGTG AACCCAGGGG
  AAAACTATAG AATAAAACCA TTAATTGATT GATAGATTCG TTGATTAGTA TATGACCGAG
  TTTGGGAGCA GAGATGAATT AAGAAAAAGG TTGGTTTAAA AGTTTGCCAT AATAAGAAAC
  AGAAGTAAAA GTGTAAAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135790726	ENSMUSSNP6476246	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51591560					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124380636 () rs orientation: forward

Symbol	Name	Function Class
Gm9379	predicted gene 9379	1541 bp downstream
Rr584593	regulatory region 584593	1019 bp distal
Rr584594	regulatory region 584594	628 bp proximal
Rr584595	regulatory region 584595	740 bp proximal