rs51582872 SNP Detail

Summary

• ID
  rs51582872
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156366008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C ATGATGGAGA GAGAGAGAAA TGGCTTCTGC AAGCTATCTT
  CTCATCTTTG CTCAGACATT GTGGTACATG CCCGTGCACG CATACCTCTC CAAATAGAAA
  C
  TAAATGTAAA CTGTTCTTAA AAGCACTGAC TCCCCAGTTT TCAGCCTTGT TTGTATATGT
  TAAATACCTA GAGGGTCATT TAAGATGTAT TTACTTATTT A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145798929	ENSMUSSNP23269	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51582872					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156366008 () rs orientation: forward

Symbol	Name	Function Class
Rr421192	regulatory region 421192	134 bp proximal
Rr421193	regulatory region 421193	1555 bp proximal
Rr421194	regulatory region 421194	1805 bp proximal