rs51581916 SNP Detail

Summary

• ID
  rs51581916
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:71148316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAG GCAGGCGGAT TTCTGAGTTC
  G
  AGGCCAGCCT GGTCTACAAA GTGAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145887951	ENSMUSSNP5065946	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325440522	CHEV_17_71190661	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs51581916					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:71148316 () rs orientation: forward

Symbol	Name	Function Class
Gm41610	predicted gene, 41610	within coordinates
Rr530331	regulatory region 530331	1604 bp proximal
Tssr149210	transcription start site region 149210	442 bp upstream
Tssr149211	transcription start site region 149211	365 bp upstream
Tssr149212	transcription start site region 149212	776 bp downstream
Tssr149213	transcription start site region 149213	1185 bp downstream