rs51581375 SNP Detail

Summary

• ID
  rs51581375
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169200261 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTTATTTA TTTTTTATTT
  TATTGCTTTA AATGTGTGTC TTTTTCTATA TGTGTCTGTG TGCCACACAT ATGCCTGGTA
  CCTGCAGAGT TCAGAAAAGG GCATCAGATC CCCTGAAACT GGAGTTATGA ATGGCTGTAA
  GCCACAAAGT GGAGACTGGC TTGCATGCAC TATGTATTCC AAGCTAGTCT TGGAAGATCA
  Y
  GGTGATCTTC TTGCTTGAAG CTCCTGAATT CTGGGATTAC ACGTGTTACC AATATTCCCA
  GAAATCTCAT TGTCTTATTG ATTTCAGTCC CCTCTGCCCC TCGGGTACTT CAAAACCAAA
  GTTAGGTCAA CCCCACCATG CTATTTCAAA AGTGTCGGCA TGCCAGATGT TAAAGTTTGG
  AGAAAGAGAA GGGGTTTGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148282814	ENSMUSSNP3446564	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss320612338	CHEV_2_169183841	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51581375					SNP	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169200261 () rs orientation: forward

Symbol	Name	Function Class
Gm75475	predicted gene, 75475	within coordinates
Rr571188	regulatory region 571188	549 bp distal
Rr571189	regulatory region 571189	1973 bp proximal