rs51567265 SNP Detail

Summary

• ID
  rs51567265
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:57598710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGTATACT TATCACTAAT
  TTGAAAATAT ACTAGTTGTT AAGTGCATTG TTAGAACCTG TTAGCTAATG TTAATAAAAC
  CCCATACCCC ATATCACTGT ATCATAAATT TGATTTTATT ATTTGAAGAT TATATTTAAA
  TCCAATTCAC TTTTTTTCTT GTTTTCTTTG AGAGAGTCAT TTACTCTCTA GCTTAACTGG
  S
  CCCAATCTTT AGAGTCCATA GTGCTAGGAT TATAAGTGTG CATCGTCTTA CCCTCCATGG
  TTCTCTCTCT CTCTCTTAAG TAGTTCTATT TTATCTTACA TATTTTATGC ATTTAACAAC
  ATTCTGAGAG ACTTTATCAT ACTTCCACAT AGATCCATGG CATATATTAG GCATTATCTC
  CTGTGTAAAA TCTAGATTGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60414480	NES15915192	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs51567265					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60414480	NES15915192	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57598710 () rs orientation: forward

Symbol	Name	Function Class
Ankub1	ankyrin repeat and ubiquitin domain containing 1	Intron
Rr577155	regulatory region 577155	551 bp proximal
Tssr33337	transcription start site region 33337	1238 bp downstream