rs51554880 SNP Detail

Summary

• ID
  rs51554880
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:74795125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCATCCTT TCTCACTGAA
  GCCAGAAAAG GCAGTTGTGT GATACACATG TGCCACCTCA TTCCAGTCTC TGTATTTGCT
  TGGTTGGTGG CTTAGTCTCT AAAAGCTCCC AAAGTTCCAG GTTAGTTGAC ATTGTCAATC
  TTCCTATGGG GTTGCCATCC ACAACAGCTC CTTCAATCCT TCCACTAACT CTTCTTTTTC
  Y
  TTTTTTTTTA ATTAGGTATT TAGCTCATTT ACATTTCCAA TGCTATACCA AAAGTCCCAC
  ATACCCACCC ACCCCCACTC TCCTACCCAC CCACTCCCCC TCTTTGGCCC TGGCGTTCCC
  CTGCACTGGG GCATATAAAG TTTGCAAGTC CAATGGGCCT CTCTTTGCAG TGATGGCCGA
  CTAGGCCATC TTTTGATACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146565621	ENSMUSSNP5197168	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51554880					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:74795125 () rs orientation: forward

Symbol	Name	Function Class
Rr594034	regulatory region 594034	1189 bp proximal