rs51543048 SNP Detail

Summary

• ID
  rs51543048
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124921863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA CCCTGATTAC TGCTGCTGTG
  S
  CCTTTGGTAC TCGGTGTCCC TGAGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145843890	ENSMUSSNP5292708	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51543048					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124921863 () rs orientation: forward

Symbol	Name	Function Class
Gm42054	predicted gene, 42054	1429 bp upstream
Rr672635	regulatory region 672635	1717 bp distal
Rr672636	regulatory region 672636	994 bp proximal
Rr672637	regulatory region 672637	1737 bp proximal
Tssr80021	transcription start site region 80021	1981 bp upstream