rs51533147 SNP Detail

Summary

• ID
  rs51533147
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66445260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCTTCAGAA AAGACAGAAG GAATAATTTA AGGTTATAAT
  TTAAAATAAT CCAAACATAG GAATAATTCT AGCACAGGTT CTGGAGTTAG CCATTGTTCC
  W
  ACTGATGTGA TAAAACCAGC CTGAGGCCAC AGGCTGGCAG CTTAACCTAG CTGTCTTCTC
  ATTTTCCAGA CAGAAGGAAG AACAATTCCC ACTGCATGTG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss63152016	NES17452122	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs51533147					SNP	T	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63152016	NES17452122	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66445260 () rs orientation: forward

Symbol	Name	Function Class
Gm15958	predicted gene 15958	within coordinates
Rr539711	regulatory region 539711	761 bp distal
Rr539712	regulatory region 539712	659 bp proximal
Rr539713	regulatory region 539713	701 bp proximal