rs51530782 SNP Detail

Summary

• ID
  rs51530782
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34284918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACAGCTCA ATCCACTAGC
  AAGTACTTCA TGGATACACC AGCAGTCCAG TTCAACAGAG TTGGGTTAGC AACAGCGGTG
  AGACTGCCTG CAGAGACAGC GAGAGACAAG TCAGCAGGAG GGACCAGAAG GAACACAGGA
  GTTCTTGGCT GTGCCTCTCT CAGGGAAGGG AAAATCAGCA TAGACTCCAG GCTCAGAATT
  R
  TTGCACAGCT AGCTCTATAA GCAAGCCAAG CGCAGCCTCC ATCACTGCCC ATTAAGTCCT
  TTTATCTTCT CTCTGAACAT CATGTGTCCT CCGTGAGCCT TGCCTCAGCA CATGTCTTGT
  CTCAGCACAA GTGTCTATCT CAGCCCGAGT CTGCAGAGTC AGCAAGAAAC TGCAGCACAC
  CACCAGAAGT TTTTGGTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134764577	ENSMUSSNP7246312	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51530782					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34284918 () rs orientation: forward

Symbol	Name	Function Class
Rr575112	regulatory region 575112	1003 bp proximal
Rr575113	regulatory region 575113	1285 bp proximal