rs51521254 SNP Detail

Summary

• ID
  rs51521254
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33972861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGAGTGGT TGCCTAACGT
  GTACAGAGAA CCCCGGGCTG CTTAAGGCAG GTGAGATGGT GTACTTCTAA AGTCTCACCA
  CTTGGAAGGT AGAGGCAGAG GAGCAAAGGT CATCCTTAGC GACAGTGAGT TTGATGTTAG
  CCTAGACTAC ATGAGACCCA ATTCCAAAAA AAAAAAAAAA AAATACTATG TCTTTTTAAA
  C
  TTAAGATTTC ATAGCAGTTA TTATTTTGCT ATAACATTAT CAAAAAGCCG ATTGAATTCA
  AAGCAGTTTC AACTAGAAAA CTCAGCTCAG CTCCCCATTT AGAATCAAAC ACAAAAACTC
  CTTTTAGAGA TGGCTGTAAA TATTTGTTAG TTTACTGATG AGATGGGAAA GGAGCAGAGG
  AGCGAAGAGA CTGGAAGAGA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss134760330	ENSMUSSNP3615796	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs51521254					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33972861 () rs orientation: forward

Symbol	Name	Function Class
Rr575083	regulatory region 575083	204 bp distal
Rr575084	regulatory region 575084	127 bp proximal
Rr575085	regulatory region 575085	243 bp proximal