rs51520868 SNP Detail

Summary

• ID
  rs51520868
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37843063 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTA AGTCTGAGGA CCGGATGATC
  C
  CGAACCCACT TTAAAAAAGC CACAC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134814037	ENSMUSSNP5145413	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320712820	CHEV_3_37687836	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs51520868					SNP	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37843063 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	1793 bp distal
Rr575565	regulatory region 575565	173 bp distal
Rr575566	regulatory region 575566	408 bp proximal