rs51512740 SNP Detail

Summary

• ID
  rs51512740
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:108307485 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGGCTCAG GCCGCTGTGT CTGATAGTAC ATGGGTGCTA
  GGTGTCCTAA CTGAAATCCT CATGCACGTG CCGCCGACAC TTACCAGCAG TGTCAGTTCT
  M
  CAGCCCTTTA AGCAGTGGTG GCTTGTTGGG TGCTTGTCTT GTTGGTCACA CAAGTCCTTG
  TAACAGAAAC TGTAGGCAGG CACTGAGGGA GAGGGCACT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133499671	ENSMUSSNP1817681	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51512740					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108307485 () rs orientation: forward

Symbol	Name	Function Class
Itpr1	inositol 1,4,5-trisphosphate receptor 1	Intron
Rr399812	regulatory region 399812	1914 bp downstream
Rr636077	regulatory region 636077	within coordinates