rs51508044 SNP Detail

Summary

• ID
  rs51508044
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29121649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGCGGTAG TGTGGGCCTG
  GGATATCAAC ACAATTCCTA GCTGCCACAG GGTCATGGAC CCAGATATGG GACCCAGCAG
  CAATAACATG GGCCTGGATA TCCCCATGAC CTCTCAGGGC AATACCGGTG AGTCCTCCAG
  TGGTTCATTT ATATGAAGAG TTGTTTTTGT TTTTGTTTCA GAGTTGTTAC AGCCTTACCT
  R
  TCCTATACTC AGGATAGAGA CTCACAGGTT TTATATTTAG TAGCATGTCT ACAGTCTATG
  CTAGAGAACC CACTGAGGCC CACTGGCACT ACAGTGAATG CCTGTAAGGT GCTGTATGGT
  GCTATCACCA ACCACAGAGT AAAATGGTTC AGGACCCTTT GGGAGGAGAG AAAGTAAACT
  TCAACTTGCT TGTTTTGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	KK/HlJ	PWD/PhJ	WSB/EiJ
ss60381980	NES15888705	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	KK/HlJ	PWD/PhJ	WSB/EiJ
rs51508044					SNP	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60381980	NES15888705	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29121649 () rs orientation: forward

Symbol	Name	Function Class
Rr574657	regulatory region 574657	1113 bp proximal