rs51488746 SNP Detail

Summary

• ID
  rs51488746
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165948423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAGTACTC ATCTTTGTAT
  AACTGGGACT GGGTAGGGAG TGGTAACTGA CTCCCCAGGG AAGAGTGAGG ATGGATCTGG
  AAAGTTCTCC ACAGCAGGGG AGTGGGTGAA GTGTGTTTTA TACAGAAGCA AGTACTAAGG
  TGCCAGGGCA GGGATGACCG TACCACAGAG AGGGTCAGTG GCCCGCGTAT GAATGGAACA
  R
  AAGAGCCAGA GGCAGGAGAG ACGTGAACAG GTGAGCCCGA TAGAAGGAGC TGTGGGTTTA
  TCTCAGGAAC TCAGAACAGC CAGGGGAGGG TTTCAATCAG AGTGCAGCTT TTCAAGGCAC
  CCCCTGTTGT CCTCTTTGGG GAGTAGGGGT GGTTGGCTAG TCACCAGGGG AAAGAAGGGC
  CAGGCAGCTC ACAAGGACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148249577	ENSMUSSNP2772860	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs51488746					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165948423 () rs orientation: forward

Symbol	Name	Function Class
Rr570135	regulatory region 570135	142 bp distal
Rr570136	regulatory region 570136	141 bp proximal
Rr570137	regulatory region 570137	1893 bp proximal
Sulf2	sulfatase 2	Intron