rs51483462 SNP Detail

Summary

• ID
  rs51483462
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90571466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCCAGGG AAGGGGAAAT
  AGAGTAGATT TTGTGGGTGC ATGGTGGATA AGGGTGAGAG GGATGGGAAC AGGAGAGATC
  AGATTGGGGA GGGAGAGACA GAGGCAGAGA GAACAGGAGA GACGACTGAA ATAGGTGGGC
  ATTTAGGGGG TGATATGGGA ACTTAGTGCA GTGGAAACTT CCTGGAACAT AAGAGGTTGA
  Y
  TGTAGCAAGG ACTCCTAGTA GTGGAGGATA TAGAGCCTGA ACCAGTCAAC TTCTGTAACT
  AGGTAAGTGT TACAGAAGAT GCAATAAGGC TCAGCACAGA CTCTCGTATC AAGGCTCGAC
  AAAGTGGTGG GTCTGGAACA TCAACCCAGC AACAAAATCT ATGACCCACA ACCTGTCCTA
  CTGGAAGGAT GTGCTGGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135478440	ENSMUSSNP469071	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51483462					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90571466 () rs orientation: forward

Symbol	Name	Function Class
Rr580434	regulatory region 580434	259 bp proximal