TAGTCTAGGG GTGGGCAAAG AAAACTGAAG CTTAAATTGT TTTTTGTGTG GTAATTAAGA TACTAGGTAA AGCTCTTGGG GTCAGTTTTG TTTTCAATCC CTTGATCTTC CCTCTCAGGA AGCAGGGACA TGTAACACAT ATTTCATAAC TTTAGATAAA GTGTGCCTTA CTATTTATAT GTAAGTGAAA GTGGGTGTTC R TCATGTCTGC TGATCTCAGG AAGAAAACAG TATTTAGAAA TGAAAGTTAC TTCCATTAAA GACCTTTAAT TACTATTATT GAAAACCTTC TCCTGAGTGC TTTAATATAT TTTGATATTA TTCTGGAACT TTAAAACGTG TTAAGCAATA ATAAAAAATA CAGTTCACAA ACTACACTTC AAAGTAACAA AAGTATTATT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
MSM/Ms |
---|---|---|---|---|---|---|---|---|---|
ss134666615 | ENSMUSSNP1677738 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | G | A |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
MSM/Ms |
||||
rs51481222 | SNP | G | G | G | A |
Location: Chr3:19363531 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
3110037C07Rik | RIKEN cDNA 3110037C07 gene | 1515 bp upstream | ||||||
Cpgi13002 | CpG island 13002 | 1077 bp proximal | ||||||
Pde7a | phosphodiesterase 7A | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr573969 | regulatory region 573969 | 524 bp proximal | ||||||
Rr573970 | regulatory region 573970 | 1945 bp proximal | ||||||
Tssr28510 | transcription start site region 28510 | 1325 bp upstream | ||||||
Tssr28511 | transcription start site region 28511 | 1481 bp upstream | ||||||
Tssr32696 | transcription start site region 32696 | 1876 bp downstream | ||||||
Tssr32697 | transcription start site region 32697 | 1902 bp downstream | ||||||
Tssr32698 | transcription start site region 32698 | 1966 bp downstream | ||||||
Tssr32699 | transcription start site region 32699 | 1982 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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