rs51478655 SNP Detail

Summary

• ID
  rs51478655
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:143821333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCTAGAAA GGCACTAATG TCTGCAGGAT CCAGAACTTT
  GGATTCCCAG AGGAGCAGAG GGAGGTAAGA ATGGAATAGG TACAAGATTT CACAGGCCCC
  M
  GAGAGCCAGC TTTACCCCAC AGTGTGCAGT GACTAAAGGG AATCTTGCTT GGGATGCCAG
  GAGGGACAAG GCTTGAAGAA GACAGTTCAG GAAAGGGCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147776932	ENSMUSSNP2985411	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51478655					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143821333 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr566349	regulatory region 566349			1352 bp proximal
Rr566350	regulatory region 566350			1559 bp proximal
Rrbp1	ribosome binding protein 1			Intron
				Noncoding-Transcript-Variant