rs51464058 SNP Detail

Summary

• ID
  rs51464058
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34251182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCGTTCCC TAGGAAGGGA
  AAAAAGTGAA TGGAGAATGG GAGAGAAGCG GGAGCTGTGG ACCGGGTGTT GAAGTTACCG
  TGGCTCTGTG GACTCAGTCG TCTCCAGTGG GGCCGAAGTT GGACGTCTCG CTGTCCAGGA
  GACTGAGCGG TCTGAGCAGG GAAAGTTTGG AGCTCCGCGT GATTGGAAAG AATGAAGGTG
  K
  GAGGATTCTG CCAACTTTTT CCTTTCTCTG CGTGTGCTGG GATCTTGTGG GGACTGCTTC
  AAGAGAACCC GCAGATGTGA GTTTCCCGAC GACTAACACT TACTTCCCTC TTCTTTTTGC
  CTGCTAGATT TCTTCTCACC AACCCCTCTT CACCCGTCGG AGCCAGAAGG ATGTGTGGAT
  AGACGGCTTA AGAACAGTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134764181	ENSMUSSNP3246028	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs51464058					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34251182 () rs orientation: forward

Symbol	Name	Function Class
Rr575108	regulatory region 575108	95 bp distal
Rr575109	regulatory region 575109	within coordinates
Rr575110	regulatory region 575110	1264 bp proximal
Tssr28802	transcription start site region 28802	277 bp downstream
Tssr28803	transcription start site region 28803	243 bp downstream
Tssr28804	transcription start site region 28804	100 bp downstream