rs51463454 SNP Detail

Summary

• ID
  rs51463454
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:119742897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCTTCCAT CACTTGCACA
  AACACTGAGA ACAAACAAGC CCCCTGCCCC GCCCCCAAAT CCATCTCTGC TAGCAGCTCG
  CAAGCATCTC CTTCTCTCTC CCAGGGCTTT CTCCTAGGAC TGAAGATTTA TCTTGGCCTT
  ACTTCAGACA TTCCCCTCTG CTCTTCCACG GGCTGCGTTC TTCTCCAATG TTTCCTCCCT
  R
  CCTCCCTTGG TACTCATTAA TTAACTGCTC CTCGCTGTGT GACTAAACGA GAGCCGAGAG
  CTGTTGTGTT TGGCTATAGA GAGGATTATG ACATTTTGCA AACATGAGCG CGCGCGCGCG
  TGCGCGCATA CACACACACA CACACACACA CACACACACA CACACAGACA CACACACAGA
  CACACACAGG GGCGGGAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135700193	ENSMUSSNP5724885	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs51463454					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:119742897 () rs orientation: forward

Symbol	Name	Function Class
Gm65304	predicted gene, 65304	within coordinates
Rr583954	regulatory region 583954	1681 bp distal
Rr583955	regulatory region 583955	within coordinates
Rr583956	regulatory region 583956	34 bp proximal
Rr583957	regulatory region 583957	1535 bp proximal